Open
Conversation
Open
Contributor
Author
|
pre-commit.ci autofix |
for more information, see https://pre-commit.ci
Codecov Report✅ All modified and coverable lines are covered by tests. Additional details and impacted files@@ Coverage Diff @@
## main #72 +/- ##
==========================================
+ Coverage 88.16% 89.19% +1.03%
==========================================
Files 7 6 -1
Lines 338 324 -14
==========================================
- Hits 298 289 -9
+ Misses 40 35 -5 ☔ View full report in Codecov by Sentry. 🚀 New features to boost your workflow:
|
Contributor
Author
|
pre-commit.ci autofix |
hannahbaumann
commented
Feb 6, 2026
hannahbaumann
commented
Feb 6, 2026
jthorton
reviewed
Feb 10, 2026
There was a problem hiding this comment.
use a consistent type for the dataset it seems to interchange nc.Dataset and netCDF4.Dataset.
Contributor
Author
There was a problem hiding this comment.
Changed this!
jthorton
reviewed
Feb 10, 2026
src/openfe_analysis/rmsd.py
Outdated
| ) -> dict[str, list[float]]: | ||
| """Generate structural analysis of RBFE simulation | ||
| """ | ||
| Compute structural RMSD-based metrics for a multistate RBFE simulation. |
There was a problem hiding this comment.
Just checking this is correct and it only works on RBFEs and not ABFEs as well?
Contributor
Author
There was a problem hiding this comment.
It should also work for ABFE so I changed this to BFE.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
No description provided.